By Zhanjiang (John) Liu
Fresh advancements in DNA marker applied sciences, specifically the emergence of unmarried Nucleotide Polymorphism (SNP) discovery, have rendered a few of the conventional tools of genetic study superseded. subsequent new release Sequencing and entire Genome choice in Aquaculture comprehensively covers the present country of study in complete genome choice and applies those discoveries to the aquaculture particularly. The textual content starts off with a radical overview of SNP and transitions into subject matters comparable to subsequent new release sequencing, EST information mining, SNP caliber review, and entire genome choice ideas. finishing with a dialogue of the technology's particular functions to the undefined, this article will be a necessary reference for these thinking about all elements of aquaculture research.Special Features: Unique linking of SNP applied sciences, subsequent iteration sequencing applied sciences, and full genome choice within the context of aquaculture researchThorough overview of unmarried Nucleotide Polymorphism and current research8-page colour plate part that includes precise illustrations
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Extra resources for Next Generation Sequencing and Whole Genome Selection in Aquaculture
Sample text
Microsatellite-containing genes from the channel catfish brain: Evidence of trinucleotide repeat expansion in the coding region of nucleotide excision repair gene RAD23B. Biochem Biophys Res Commun, 289:317–324. Liu ZJ, Karsi A, Li P, Cao DF, and Dunham R. 2003. An AFLP-based genetic linkage map of channel catfish (Ictalurus punctatus) constructed by using an interspecific hybrid resource family. Genetics, 165:687–694. Lyall JEW, Brown GM, Furlong RA, Fergusonsmith MA, and Affara NA. 1993. A method for creating chromosome-specific plasmid libraries enriched in clones containing [Ca]N microsatellite repeat sequences directly from flow-sorted chromosomes.
At the molecular level, CNV can be caused by translocations, inversions, deletions, and duplications. If the involved chromosomal segments are large in size, such chromosomal alterations can be detected by cytogenetic techniques such as karyotype analysis. , 1999). Moreover, with fluorescence in situ hybridization (FISH), structural variations can be discerned even when a small chromosomal segment is involved. Chromosome banding also allows detection of a great variety of heteromorphisms. , 1978).
29–42. Liu ZJ. 2007d. Single nucleotide polymorphism (SNP). In: Aquaculture Genome Technologies, edited by ZJ Liu. Blackwell Publishing, Ames, IA, pp. 59–72. Liu ZJ and Cordes JF. 2004. DNA marker technologies and their applications in aquaculture genetics (vol 238, pg 1, 2004). Aquaculture, 242:735–736. Liu ZJ, Li P, Kucuktas H, Nichols A, Tan G, Zheng XM, Argue BJ, and Dunham RA. 1999. Development of amplified fragment length polymorphism (AFLP) markers suitable for genetic linkage mapping of catfish.